Cobalt in PDB 6xbq: Streptomyces Coelicolor Methylmalonyl-Coa Epimerase in Complex with Carboxy-Carba(Dethia)-Coa

The structure of Streptomyces Coelicolor Methylmalonyl-Coa Epimerase in Complex with Carboxy-Carba(Dethia)-Coa, PDB code: 6xbq was solved by L.M.Stunkard, T.J.Boram, A.B.Benjamin, J.B.Bower, J.R.Lohman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.56 / 1.64
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	68.504, 68.504, 103.315, 90.00, 90.00, 90.00
R / Rfree (%)	15.4 / 17.5

The binding sites of Cobalt atom in the Streptomyces Coelicolor Methylmalonyl-Coa Epimerase in Complex with Carboxy-Carba(Dethia)-Coa (pdb code 6xbq). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Streptomyces Coelicolor Methylmalonyl-Coa Epimerase in Complex with Carboxy-Carba(Dethia)-Coa, PDB code: 6xbq:

Cobalt binding site 1 out of 1 in the Streptomyces Coelicolor Methylmalonyl-Coa Epimerase in Complex with Carboxy-Carba(Dethia)-Coa


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Streptomyces Coelicolor Methylmalonyl-Coa Epimerase in Complex with Carboxy-Carba(Dethia)-Coa within 5.0Å range: probe atom residue distance (Å) B Occ A:Co201 b:34.4 occ:1.00 OE1 A:GLN60 2.1 16.5 0.5 OE1 A:GLU134 2.1 20.4 1.0 NE2 A:HIS7 2.2 18.5 1.0 O21 A:CMX204 2.2 24.1 1.0 NE2 A:HIS84 2.2 18.6 1.0 OE1 A:GLN60 2.3 24.7 0.5 O A:HOH320 2.3 23.2 1.0 CE1 A:HIS84 3.0 21.3 1.0 CD A:GLN60 3.0 17.2 0.5 CD A:GLU134 3.1 24.5 1.0 CE1 A:HIS7 3.1 21.6 1.0 CD2 A:HIS7 3.2 18.0 1.0 CD A:GLN60 3.2 24.4 0.5 CD2 A:HIS84 3.2 18.0 1.0 C2 A:CMX204 3.2 29.3 1.0 OE2 A:GLU134 3.5 29.4 1.0 NE2 A:GLN60 3.5 19.7 0.5 NE2 A:GLN60 3.6 25.0 0.5 O22 A:CMX204 3.6 30.7 1.0 ND1 A:HIS84 4.1 18.6 1.0 ND1 A:HIS7 4.3 19.6 1.0 CG A:HIS84 4.3 17.5 1.0 CG A:HIS7 4.3 17.6 1.0 CG A:GLN60 4.4 17.1 0.5 CG A:GLU134 4.4 22.1 1.0 C1 A:CMX204 4.5 26.0 1.0 CG A:GLN60 4.6 23.2 0.5 CZ A:PHE122 4.7 21.8 1.0 CB A:GLU134 4.7 19.8 1.0 C2P A:CMX204 4.8 28.3 1.0 CE1 A:PHE122 4.8 22.5 1.0 CB A:ALA86 4.8 19.5 1.0 CB A:GLN60 4.8 17.5 0.5 CB A:GLN60 4.8 20.8 0.5

L.M.Stunkard, T.J.Boram, A.B.Benjamin, J.B.Bower, J.R.Lohman. Streptomyces Coelicolor Methylmalonyl-Coa Epimerase in Complex with Carboxy-Carba(Dethia)-Coa To Be Published.