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Cobalt in PDB 7f7k: Crystal Structure of AKR4C17 Bound with Nadp+

Protein crystallography data

The structure of Crystal Structure of AKR4C17 Bound with Nadp+, PDB code: 7f7k was solved by H.Li, Y.Yang, Y.Hu, C.-C.Chen, J.-W.Huang, J.Min, L.Dai, R.-T.Guo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.89 / 2.36
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 77.671, 77.671, 454.088, 90, 90, 120
R / Rfree (%) 18.8 / 22.7

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of AKR4C17 Bound with Nadp+ (pdb code 7f7k). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of AKR4C17 Bound with Nadp+, PDB code: 7f7k:

Cobalt binding site 1 out of 1 in 7f7k

Go back to Cobalt Binding Sites List in 7f7k
Cobalt binding site 1 out of 1 in the Crystal Structure of AKR4C17 Bound with Nadp+


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of AKR4C17 Bound with Nadp+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co403

b:40.0
occ:1.00
NE2 A:HIS171 2.1 38.3 1.0
CD2 A:HIS171 3.0 27.6 1.0
CE1 A:HIS171 3.1 38.0 1.0
O A:ALA168 4.0 35.8 1.0
CG A:HIS171 4.2 36.9 1.0
ND1 A:HIS171 4.2 36.4 1.0
O A:LEU165 4.5 31.3 1.0
O A:ARG169 4.7 31.9 1.0

Reference:

H.Li, Y.Yang, Y.Hu, C.C.Chen, J.W.Huang, J.Min, L.Dai, R.T.Guo. Structural Analysis and Engineering of Aldo-Keto Reductase From Glyphosate-Resistant Echinochloa Colona J Hazard Mater V. 436 29191 2022.
ISSN: ESSN 1873-3336
DOI: 10.1016/J.JHAZMAT.2022.129191
Page generated: Tue Apr 4 23:00:16 2023

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