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Cobalt in PDB 7qov: The Wild Type Nitrile Hydratase From Geobacillus Pallidus

Enzymatic activity of The Wild Type Nitrile Hydratase From Geobacillus Pallidus

All present enzymatic activity of The Wild Type Nitrile Hydratase From Geobacillus Pallidus:
4.2.1.84;

Protein crystallography data

The structure of The Wild Type Nitrile Hydratase From Geobacillus Pallidus, PDB code: 7qov was solved by J.C.Van Wyk, D.A.Cowan, M.J.Danson, T.L.Tsekoa, M.F.Sayed, B.T.Sewell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.59 / 1.40
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 105.476, 105.476, 83.093, 90, 90, 90
R / Rfree (%) n/a / 18

Other elements in 7qov:

The structure of The Wild Type Nitrile Hydratase From Geobacillus Pallidus also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Cobalt Binding Sites:

The binding sites of Cobalt atom in the The Wild Type Nitrile Hydratase From Geobacillus Pallidus (pdb code 7qov). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the The Wild Type Nitrile Hydratase From Geobacillus Pallidus, PDB code: 7qov:

Cobalt binding site 1 out of 1 in 7qov

Go back to Cobalt Binding Sites List in 7qov
Cobalt binding site 1 out of 1 in the The Wild Type Nitrile Hydratase From Geobacillus Pallidus


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of The Wild Type Nitrile Hydratase From Geobacillus Pallidus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co301

b:8.6
occ:1.00
N A:CSD121 2.0 9.3 1.0
N A:SER120 2.0 9.7 1.0
O A:HOH403 2.1 10.6 0.5
SG A:CSD119 2.1 9.2 1.0
SG A:CSD121 2.1 10.4 1.0
SG A:CYS116 2.3 9.6 1.0
C A:SER120 2.8 10.1 1.0
CA A:SER120 2.8 9.9 1.0
CA A:CSD121 3.0 9.6 1.0
CB A:CSD121 3.0 9.8 1.0
C A:CSD119 3.1 9.4 1.0
OD1 A:CSD121 3.1 11.2 1.0
CB A:CSD119 3.1 9.2 1.0
OD2 A:CSD119 3.2 11.0 1.0
OD1 A:CSD119 3.2 10.0 1.0
CB A:CYS116 3.3 9.0 1.0
OD2 A:CSD121 3.4 13.5 1.0
CA A:CSD119 3.4 9.2 1.0
OG A:SER120 3.7 12.2 1.0
N A:CSD119 3.8 8.8 1.0
CB A:SER120 3.9 10.6 1.0
O A:SER120 4.0 10.0 1.0
O A:CSD119 4.2 9.5 1.0
C A:CSD121 4.3 9.2 1.0
O A:CSD121 4.6 8.9 1.0
CA A:CYS116 4.7 8.2 1.0
NH2 B:ARG160 4.8 9.0 1.0
O A:CYS116 4.9 7.7 1.0
C A:LEU118 4.9 8.3 1.0

Reference:

J.C.Van Wyk, D.A.Cowan, M.J.Danson, T.L.Tsekoa, M.F.Sayed, B.T.Sewell. The Wild Type Nitrile Hydratase From Geobacillus Pallidus at 1.40 Angstroms Resolution To Be Published.
Page generated: Tue Apr 4 23:01:58 2023

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