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Cobalt in PDB 7te2: Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A.

Protein crystallography data

The structure of Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A., PDB code: 7te2 was solved by V.Dragnea, G.Gonzalez-Gutierrez, C.E.Bauer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.32 / 2.25
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 63.939, 63.939, 182.298, 90, 90, 120
R / Rfree (%) 23 / 25.9

Other elements in 7te2:

The structure of Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A. also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A. (pdb code 7te2). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A., PDB code: 7te2:

Cobalt binding site 1 out of 1 in 7te2

Go back to Cobalt Binding Sites List in 7te2
Cobalt binding site 1 out of 1 in the Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A.


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Aerr From Rhodobacter Capsulatus at 2.25 A. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co301

b:25.4
occ:1.00
CO A:B12301 0.0 25.4 1.0
N21 A:B12301 1.8 31.8 1.0
N23 A:B12301 1.8 30.3 1.0
N24 A:B12301 1.9 29.4 1.0
N22 A:B12301 1.9 31.4 1.0
NE2 A:HIS105 2.2 24.6 1.0
C19 A:B12301 2.7 25.9 1.0
C14 A:B12301 2.8 27.4 1.0
C1 A:B12301 2.8 26.3 1.0
C4 A:B12301 2.8 29.8 1.0
C11 A:B12301 2.8 29.2 1.0
C9 A:B12301 2.9 30.9 1.0
C6 A:B12301 2.9 31.0 1.0
C16 A:B12301 2.9 25.0 1.0
CE1 A:HIS105 3.1 24.8 1.0
CD2 A:HIS105 3.1 22.9 1.0
C10 A:B12301 3.2 31.8 1.0
C5 A:B12301 3.3 31.6 1.0
C15 A:B12301 3.3 21.6 1.0
CL A:CL304 3.3 51.6 1.0
C20 A:B12301 3.6 21.7 1.0
C2 A:B12301 4.0 26.6 1.0
C3 A:B12301 4.1 28.3 1.0
C13 A:B12301 4.1 27.6 1.0
C18 A:B12301 4.1 27.8 1.0
C12 A:B12301 4.2 28.1 1.0
C17 A:B12301 4.2 24.7 1.0
C8 A:B12301 4.2 31.0 1.0
ND1 A:HIS105 4.2 23.7 1.0
C7 A:B12301 4.2 31.5 1.0
CG A:HIS105 4.3 22.1 1.0
C26 A:B12301 4.4 27.8 1.0
O39 A:B12301 4.6 38.0 1.0
C35 A:B12301 4.7 32.8 1.0
C53 A:B12301 4.8 17.1 1.0
C48 A:B12301 4.9 25.6 1.0
C46 A:B12301 5.0 28.3 1.0
C54 A:B12301 5.0 23.7 1.0

Reference:

V.Dragnea, G.Gonzalez-Gutierrez, C.E.Bauer. Structural Analyses of Crtj and Its B 12 -Binding Co-Regulators Saerr and Laerr From the Purple Photosynthetic Bacterium Rhodobacter Capsulatus. Microorganisms V. 10 2022.
ISSN: ESSN 2076-2607
PubMed: 35630357
DOI: 10.3390/MICROORGANISMS10050912
Page generated: Tue Apr 4 23:02:37 2023

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