Atomistry » Cobalt » PDB 7w6v-7yvx » 7w6v
Atomistry »
  Cobalt »
    PDB 7w6v-7yvx »
      7w6v »

Cobalt in PDB 7w6v: Crystal Structure of A Dicobalt-Substituted Small Laccase at 2.47 Angstrom

Protein crystallography data

The structure of Crystal Structure of A Dicobalt-Substituted Small Laccase at 2.47 Angstrom, PDB code: 7w6v was solved by X.Yang, F.Wu, W.Wu, X.Chen, S.Fan, P.Yu, L.Mao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.43 / 2.47
Space group P 43 3 2
Cell size a, b, c (Å), α, β, γ (°) 178.03, 178.03, 178.03, 90, 90, 90
R / Rfree (%) 18.6 / 19.8

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of A Dicobalt-Substituted Small Laccase at 2.47 Angstrom (pdb code 7w6v). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total 2 binding sites of Cobalt where determined in the Crystal Structure of A Dicobalt-Substituted Small Laccase at 2.47 Angstrom, PDB code: 7w6v:
Jump to Cobalt binding site number: 1; 2;

Cobalt binding site 1 out of 2 in 7w6v

Go back to Cobalt Binding Sites List in 7w6v
Cobalt binding site 1 out of 2 in the Crystal Structure of A Dicobalt-Substituted Small Laccase at 2.47 Angstrom


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of A Dicobalt-Substituted Small Laccase at 2.47 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co401

b:63.9
occ:1.00
NE2 A:HIS158 1.9 71.8 1.0
O A:HOH568 1.9 50.7 1.0
CD2 A:HIS158 2.9 68.2 1.0
CE1 A:HIS158 2.9 67.7 1.0
CO A:CO402 3.9 106.9 1.0
ND1 A:HIS158 4.0 50.1 1.0
CG A:HIS158 4.1 63.7 1.0
NE2 A:HIS102 4.4 67.6 1.0
CD2 A:HIS102 4.6 53.3 1.0

Cobalt binding site 2 out of 2 in 7w6v

Go back to Cobalt Binding Sites List in 7w6v
Cobalt binding site 2 out of 2 in the Crystal Structure of A Dicobalt-Substituted Small Laccase at 2.47 Angstrom


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of Crystal Structure of A Dicobalt-Substituted Small Laccase at 2.47 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co402

b:106.9
occ:1.00
O A:HOH568 2.0 50.7 1.0
NE2 A:HIS156 2.1 54.2 1.0
NE2 A:HIS104 2.1 58.2 1.0
CE1 A:HIS156 2.8 59.6 1.0
CE1 A:HIS104 3.0 47.5 1.0
CD2 A:HIS104 3.2 43.3 1.0
CD2 A:HIS156 3.3 41.5 1.0
CD2 A:HIS102 3.4 53.3 1.0
NE2 A:HIS102 3.7 67.6 1.0
CO A:CO401 3.9 63.9 1.0
ND1 A:HIS156 4.0 47.4 1.0
ND1 A:HIS104 4.1 45.6 1.0
CG A:HIS104 4.2 43.4 1.0
CG A:HIS156 4.3 48.0 1.0
CD2 A:HIS158 4.4 68.2 1.0
NE2 A:HIS158 4.6 71.8 1.0
CG A:HIS102 4.6 57.9 1.0
CB A:ALA266 4.7 59.5 1.0

Reference:

X.Yang, F.Wu, W.Wu, X.Chen, S.Fan, P.Yu, L.Mao. Small Laccase (Slac): A Versatile Artificial Metalloenzyme Scaffold Enabling Direct Bioelectrocatalysis in Solution Sci Adv V. 8 2022.
ISSN: ESSN 2375-2548
Page generated: Tue Jul 30 19:33:21 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy