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Cobalt in PDB 8hyp: Crystal Structure of Athppd-Y18400 Complex

Enzymatic activity of Crystal Structure of Athppd-Y18400 Complex

All present enzymatic activity of Crystal Structure of Athppd-Y18400 Complex:
1.13.11.27;

Protein crystallography data

The structure of Crystal Structure of Athppd-Y18400 Complex, PDB code: 8hyp was solved by J.Dong, H.-Y.Lin, G.-F.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.68 / 1.75
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 76.759, 84.02, 61.938, 90, 100.04, 90
R / Rfree (%) 17.4 / 19.6

Other elements in 8hyp:

The structure of Crystal Structure of Athppd-Y18400 Complex also contains other interesting chemical elements:

Fluorine (F) 1 atom

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Athppd-Y18400 Complex (pdb code 8hyp). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Athppd-Y18400 Complex, PDB code: 8hyp:

Cobalt binding site 1 out of 1 in 8hyp

Go back to Cobalt Binding Sites List in 8hyp
Cobalt binding site 1 out of 1 in the Crystal Structure of Athppd-Y18400 Complex


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Athppd-Y18400 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co501

b:20.3
occ:1.00
O24 A:T8U502 2.0 20.9 1.0
O7 A:T8U502 2.0 20.6 1.0
OE1 A:GLU394 2.1 18.1 1.0
NE2 A:HIS308 2.3 17.4 1.0
NE2 A:HIS226 2.3 18.1 1.0
O A:HOH646 2.4 18.5 1.0
C9 A:T8U502 3.1 25.3 1.0
CD A:GLU394 3.1 19.5 1.0
CE1 A:HIS308 3.1 19.5 1.0
C6 A:T8U502 3.2 25.1 1.0
CE1 A:HIS226 3.2 16.0 1.0
CD2 A:HIS226 3.3 18.1 1.0
CD2 A:HIS308 3.4 17.9 1.0
OE2 A:GLU394 3.4 19.7 1.0
C5 A:T8U502 3.6 23.3 1.0
ND1 A:HIS308 4.3 16.9 1.0
C10 A:T8U502 4.3 24.8 1.0
ND1 A:HIS226 4.4 17.8 1.0
CB A:ALA310 4.4 18.0 1.0
O A:PHE419 4.4 23.2 1.0
CG A:HIS226 4.4 18.0 1.0
CG A:GLU394 4.4 17.2 1.0
CG A:HIS308 4.4 16.8 1.0
CG2 A:VAL228 4.5 17.3 1.0
CE1 A:PHE381 4.5 20.5 1.0
C1 A:T8U502 4.5 25.5 1.0
CB A:GLU394 4.6 15.4 1.0
CD2 A:PHE419 4.7 21.4 1.0
C23 A:T8U502 4.7 25.9 1.0
CB A:PHE419 4.8 23.1 1.0
CZ A:PHE381 4.9 24.2 1.0
C15 A:T8U502 5.0 28.4 1.0

Reference:

J.Dong, H.-Y.Lin, G.-F.Yang. Crystal Structure of Athppd-Y18400 Complex To Be Published.
Page generated: Thu Dec 28 03:44:48 2023

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