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Cobalt in PDB 8i2u: Crystal Structure of Athppd-YH20282 Complex

Enzymatic activity of Crystal Structure of Athppd-YH20282 Complex

All present enzymatic activity of Crystal Structure of Athppd-YH20282 Complex:
1.13.11.27;

Protein crystallography data

The structure of Crystal Structure of Athppd-YH20282 Complex, PDB code: 8i2u was solved by J.Dong, H.-Y.Lin, G.-F.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.72 / 1.99
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 77.411, 84.06, 62.6, 90, 100.56, 90
R / Rfree (%) 18 / 22.1

Other elements in 8i2u:

The structure of Crystal Structure of Athppd-YH20282 Complex also contains other interesting chemical elements:

Silicon (Si) 1 atom
Chlorine (Cl) 1 atom

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Athppd-YH20282 Complex (pdb code 8i2u). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Athppd-YH20282 Complex, PDB code: 8i2u:

Cobalt binding site 1 out of 1 in 8i2u

Go back to Cobalt Binding Sites List in 8i2u
Cobalt binding site 1 out of 1 in the Crystal Structure of Athppd-YH20282 Complex


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Athppd-YH20282 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co501

b:27.0
occ:1.00
O7 A:T5I502 2.0 20.9 1.0
OE1 A:GLU394 2.0 19.6 1.0
O11 A:T5I502 2.0 21.9 1.0
NE2 A:HIS226 2.3 16.8 1.0
NE2 A:HIS308 2.4 15.5 1.0
O A:HOH654 2.4 19.2 1.0
CD A:GLU394 3.0 20.0 1.0
C9 A:T5I502 3.0 25.8 1.0
C6 A:T5I502 3.1 22.4 1.0
CE1 A:HIS226 3.2 17.2 1.0
CE1 A:HIS308 3.3 19.6 1.0
OE2 A:GLU394 3.3 18.7 1.0
CD2 A:HIS226 3.4 18.8 1.0
CD2 A:HIS308 3.4 18.6 1.0
C5 A:T5I502 3.5 20.8 1.0
C10 A:T5I502 4.3 23.7 1.0
O A:PHE419 4.4 25.9 1.0
ND1 A:HIS226 4.4 16.9 1.0
CB A:ALA310 4.4 14.3 1.0
CG A:GLU394 4.4 14.9 1.0
C1 A:T5I502 4.5 25.4 1.0
ND1 A:HIS308 4.5 17.9 1.0
CG A:HIS226 4.5 17.1 1.0
CG2 A:VAL228 4.5 14.5 1.0
CE2 A:PHE381 4.5 19.7 1.0
CG A:HIS308 4.5 15.4 1.0
CB A:GLU394 4.6 18.9 1.0
CZ A:PHE381 4.8 24.2 1.0
CB A:PHE419 4.8 21.6 1.0
CD2 A:PHE419 4.9 24.1 1.0
NE2 A:GLN379 5.0 24.5 1.0

Reference:

J.Dong, H.-Y.Lin, G.-F.Yang. Crystal Structure of Athppd-YH20282 Complex To Be Published.
Page generated: Thu Dec 28 03:45:07 2023

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