Cobalt in PDB 8p98: BTUB3G3 Bound to Cyanocobalamin with Ordered EL8

The binding sites of Cobalt atom in the BTUB3G3 Bound to Cyanocobalamin with Ordered EL8 (pdb code 8p98). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the BTUB3G3 Bound to Cyanocobalamin with Ordered EL8, PDB code: 8p98:

Cobalt binding site 1 out of 1 in the BTUB3G3 Bound to Cyanocobalamin with Ordered EL8


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of BTUB3G3 Bound to Cyanocobalamin with Ordered EL8 within 5.0Å range: probe atom residue distance (Å) B Occ B:Co401 b:151.2 occ:1.00 CO B:CNC401 0.0 151.2 1.0 N21 B:CNC401 1.9 112.3 1.0 N23 B:CNC401 1.9 116.9 1.0 N24 B:CNC401 1.9 116.0 1.0 N22 B:CNC401 1.9 116.4 1.0 C1A B:CNC401 1.9 114.6 1.0 N3B B:CNC401 2.6 105.7 1.0 C19 B:CNC401 2.8 111.1 1.0 C11 B:CNC401 2.8 113.5 1.0 C9 B:CNC401 2.9 108.7 1.0 C1 B:CNC401 2.9 110.4 1.0 C4 B:CNC401 2.9 107.1 1.0 C16 B:CNC401 2.9 112.6 1.0 C14 B:CNC401 3.0 114.4 1.0 C6 B:CNC401 3.0 113.2 1.0 N1A B:CNC401 3.1 109.6 1.0 C10 B:CNC401 3.2 111.6 1.0 C5 B:CNC401 3.4 111.5 1.0 C15 B:CNC401 3.4 113.5 1.0 C2B B:CNC401 3.5 102.0 1.0 C20 B:CNC401 3.6 112.9 1.0 C9B B:CNC401 3.7 108.8 1.0 C12 B:CNC401 4.0 113.5 1.0 C18 B:CNC401 4.0 111.0 1.0 C2 B:CNC401 4.1 107.5 1.0 C8 B:CNC401 4.2 106.7 1.0 C3 B:CNC401 4.2 106.1 1.0 C4B B:CNC401 4.2 109.1 1.0 C13 B:CNC401 4.2 112.9 1.0 C17 B:CNC401 4.2 106.3 1.0 C7 B:CNC401 4.2 108.3 1.0 C47 B:CNC401 4.4 111.3 1.0 C26 B:CNC401 4.5 114.7 1.0 C41 B:CNC401 4.7 108.5 1.0 C37 B:CNC401 4.7 113.2 1.0 N1B B:CNC401 4.7 103.2 1.0 C35 B:CNC401 4.7 110.7 1.0 C8B B:CNC401 4.8 109.2 1.0 C53 B:CNC401 4.9 108.4 1.0 C49 B:CNC401 4.9 107.5 1.0 C54 B:CNC401 5.0 108.5 1.0

J.Abellon-Ruiz, K.Jana, A.Silale, A.M.Frey, A.Basle, M.Trost, U.Kleinekathofer, B.Van Den Berg. Btub Tonb-Dependent Transporters and Btug Surface Lipoproteins Form Stable Complexes For Vitamin B 12 Uptake in Gut Bacteroides. Nat Commun V. 14 4714 2023.
ISSN: ESSN 2041-1723
PubMed: 37543597
DOI: 10.1038/S41467-023-40427-2