Cobalt in PDB 8ptd: The Surface-Exposed Lipo-Protein of BTUG1 in Complex with Cyanocobalamin.

The structure of The Surface-Exposed Lipo-Protein of BTUG1 in Complex with Cyanocobalamin., PDB code: 8ptd was solved by J.Whittaker, J.M.Felices Martinez, A.Guskov, D.J.Slotboom, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.26 / 1.60
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	52.471, 147.665, 116.043, 90, 90, 90
R / Rfree (%)	17.2 / 19.2

The structure of The Surface-Exposed Lipo-Protein of BTUG1 in Complex with Cyanocobalamin. also contains other interesting chemical elements:

Sodium

(Na)

2 atoms

The binding sites of Cobalt atom in the The Surface-Exposed Lipo-Protein of BTUG1 in Complex with Cyanocobalamin. (pdb code 8ptd). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the The Surface-Exposed Lipo-Protein of BTUG1 in Complex with Cyanocobalamin., PDB code: 8ptd:

Cobalt binding site 1 out of 1 in the The Surface-Exposed Lipo-Protein of BTUG1 in Complex with Cyanocobalamin.


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of The Surface-Exposed Lipo-Protein of BTUG1 in Complex with Cyanocobalamin. within 5.0Å range: probe atom residue distance (Å) B Occ A:Co402 b:15.4 occ:1.00 CO A:B12402 0.0 15.4 1.0 N23 A:B12402 1.9 15.7 1.0 N21 A:B12402 1.9 13.1 1.0 N22 A:B12402 1.9 14.7 1.0 N24 A:B12402 2.0 18.1 1.0 N3B A:B12402 2.4 16.3 1.0 HO A:OH403 2.8 48.5 1.0 C4 A:B12402 2.8 13.4 1.0 C14 A:B12402 2.8 15.4 1.0 C16 A:B12402 2.8 15.8 1.0 C9 A:B12402 2.9 13.9 1.0 C6 A:B12402 2.9 13.5 1.0 C11 A:B12402 2.9 13.0 1.0 O A:OH403 2.9 40.5 1.0 C19 A:B12402 3.0 19.9 1.0 C1 A:B12402 3.1 12.7 1.0 C15 A:B12402 3.2 16.2 1.0 C5 A:B12402 3.2 14.8 1.0 H202 A:B12402 3.2 18.6 1.0 C2B A:B12402 3.3 19.8 1.0 C10 A:B12402 3.3 15.5 1.0 H2B A:B12402 3.4 23.7 1.0 C9B A:B12402 3.4 15.2 1.0 H4B A:B12402 3.6 16.0 1.0 C20 A:B12402 3.7 15.5 1.0 C4B A:B12402 3.9 13.3 1.0 H203 A:B12402 4.0 18.6 1.0 H261 A:B12402 4.1 16.6 1.0 C18 A:B12402 4.1 17.2 1.0 C3 A:B12402 4.1 12.6 1.0 C17 A:B12402 4.1 13.7 1.0 C13 A:B12402 4.1 18.3 1.0 C7 A:B12402 4.2 15.1 1.0 C8 A:B12402 4.2 14.3 1.0 C12 A:B12402 4.2 18.2 1.0 C2 A:B12402 4.2 14.7 1.0 H10 A:B12402 4.3 18.6 1.0 H18 A:B12402 4.3 20.6 1.0 H372 A:B12402 4.3 16.0 1.0 N1B A:B12402 4.5 18.1 1.0 C26 A:B12402 4.5 13.8 1.0 H201 A:B12402 4.5 18.6 1.0 H371 A:B12402 4.6 16.0 1.0 H462 A:B12402 4.6 25.0 1.0 C8B A:B12402 4.6 16.3 1.0 H262 A:B12402 4.6 16.6 1.0 C37 A:B12402 4.6 13.3 1.0 H481 A:B12402 4.7 22.4 1.0 C35 A:B12402 4.7 15.0 1.0 H421 A:B12402 4.7 43.7 1.0 H3 A:B12402 4.7 15.1 1.0 C53 A:B12402 4.7 17.7 1.0 H541 A:B12402 4.7 20.3 1.0 H412 A:B12402 4.8 20.9 1.0 H13 A:B12402 4.8 21.9 1.0 H8 A:B12402 4.8 17.2 1.0 H302 A:B12402 4.8 16.6 1.0 H561 A:B12402 4.9 16.5 1.0 C54 A:B12402 4.9 16.9 1.0 C46 A:B12402 4.9 20.9 1.0 C48 A:B12402 4.9 18.6 1.0 H482 A:B12402 4.9 22.4 1.0 H542 A:B12402 4.9 20.3 1.0 C41 A:B12402 5.0 17.4 1.0 C30 A:B12402 5.0 13.8 1.0

J.Whittaker, A.Guskov. The Surface-Exposed Lipo-Protein of BTUG1 in Complex with Cyanocobalamin. To Be Published.