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Cobalt in PDB 8x74: Crystal Structure of ZMHSL1A Complexed with Mesotrione

Protein crystallography data

The structure of Crystal Structure of ZMHSL1A Complexed with Mesotrione, PDB code: 8x74 was solved by H.-Y.Lin, J.Dong, G.-F.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.23 / 1.79
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 45.866, 53.452, 75.571, 90, 104.8, 90
R / Rfree (%) 18 / 21.7

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of ZMHSL1A Complexed with Mesotrione (pdb code 8x74). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of ZMHSL1A Complexed with Mesotrione, PDB code: 8x74:

Cobalt binding site 1 out of 1 in 8x74

Go back to Cobalt Binding Sites List in 8x74
Cobalt binding site 1 out of 1 in the Crystal Structure of ZMHSL1A Complexed with Mesotrione


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of ZMHSL1A Complexed with Mesotrione within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co401

b:17.5
occ:1.00
O2 A:AKG402 2.1 17.3 1.0
NE2 A:HIS228 2.1 18.6 1.0
NE2 A:HIS285 2.1 18.8 1.0
OD1 A:ASP230 2.2 18.2 1.0
O A:HOH543 2.2 19.2 1.0
O5 A:AKG402 2.2 20.3 1.0
C1 A:AKG402 2.8 20.3 1.0
C2 A:AKG402 2.8 17.8 1.0
CE1 A:HIS228 3.0 22.8 1.0
CD2 A:HIS285 3.1 19.1 1.0
CG A:ASP230 3.1 19.5 1.0
CE1 A:HIS285 3.1 19.8 1.0
CD2 A:HIS228 3.2 20.5 1.0
OD2 A:ASP230 3.4 17.6 1.0
O1 A:AKG402 4.1 20.4 1.0
O A:HOH703 4.1 28.1 1.0
ND1 A:HIS228 4.1 20.9 1.0
O A:HOH567 4.2 23.6 1.0
ND1 A:HIS285 4.2 18.0 1.0
CG A:HIS228 4.2 18.5 1.0
CG A:HIS285 4.2 18.9 1.0
C3 A:AKG402 4.3 19.4 1.0
CB A:ASP230 4.5 18.9 1.0
CE1 A:PHE301 4.5 19.0 1.0
N A:ASP230 4.8 20.7 1.0
C4 A:AKG402 4.8 17.9 1.0
CA A:ASP230 4.9 18.0 1.0
CZ A:PHE301 4.9 19.7 1.0

Reference:

J.Dong, X.H.Yu, J.Dong, G.H.Wang, X.L.Wang, D.W.Wang, Y.C.Yan, H.Xiao, B.Q.Ye, H.Y.Lin, G.F.Yang. An Artificially Evolved Gene For Herbicide-Resistant Rice Breeding. Proc.Natl.Acad.Sci.Usa V. 121 85121 2024.
ISSN: ESSN 1091-6490
PubMed: 39133859
DOI: 10.1073/PNAS.2407285121
Page generated: Thu Oct 31 18:19:57 2024

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