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Cobalt in PDB 9ehq: Co-Mahf-9 A8M Metal Alpha-Helix Framework

Protein crystallography data

The structure of Co-Mahf-9 A8M Metal Alpha-Helix Framework, PDB code: 9ehq was solved by R.M.Richardson-Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.68 / 1.13
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 10.704, 31.364, 40.671, 90, 90, 90
R / Rfree (%) 12.4 / 15.3

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Co-Mahf-9 A8M Metal Alpha-Helix Framework (pdb code 9ehq). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Co-Mahf-9 A8M Metal Alpha-Helix Framework, PDB code: 9ehq:

Cobalt binding site 1 out of 1 in 9ehq

Go back to Cobalt Binding Sites List in 9ehq
Cobalt binding site 1 out of 1 in the Co-Mahf-9 A8M Metal Alpha-Helix Framework


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Co-Mahf-9 A8M Metal Alpha-Helix Framework within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co103

b:8.2
occ:0.50
ND1 A:HIS7 2.1 7.7 1.0
OE2 A:GLU4 2.2 9.7 1.0
OE1 A:GLU4 2.2 10.4 1.0
CD A:GLU4 2.5 10.2 1.0
CE1 A:HIS7 2.9 9.6 1.0
HE1 A:HIS7 3.0 11.5 1.0
HB3 A:HIS7 3.2 6.2 1.0
CG A:HIS7 3.3 6.7 1.0
H2 A:MOH102 3.4 33.8 1.0
CB A:HIS7 3.8 5.2 1.0
HO A:MOH102 3.9 34.5 1.0
CG A:GLU4 4.0 10.9 1.0
NE2 A:HIS7 4.1 9.4 1.0
HE2 A:MET8 4.2 9.0 1.0
HG2 A:GLU4 4.2 13.1 1.0
C A:MOH102 4.3 28.2 1.0
CD2 A:HIS7 4.3 7.6 1.0
HB2 A:HIS7 4.3 6.2 1.0
HA A:GLU4 4.4 7.6 1.0
HG3 A:GLU4 4.4 13.1 1.0
HB2 A:MET8 4.6 8.1 1.0
O A:MOH102 4.6 28.8 1.0
HA A:MET8 4.6 7.1 1.0
N A:MET8 4.7 5.8 1.0
H A:MET8 4.7 7.0 1.0
C A:HIS7 4.7 5.2 1.0
H1 A:MOH102 4.8 33.8 1.0
H3 A:MOH102 4.8 33.8 1.0
HE2 A:HIS7 4.8 11.3 1.0
HB2 A:GLU4 4.8 11.2 1.0
CA A:HIS7 4.9 5.7 1.0
CB A:GLU4 4.9 9.3 1.0

Reference:

R.Richardson-Matthews, K.Velko, B.Bhunia, S.Ghosh, J.Oktawiec, J.S.Brunzelle, V.T.Dang, A.I.Nguyen. Metal-Alpha-Helix Peptide Frameworks. J.Am.Chem.Soc. 2025.
ISSN: ESSN 1520-5126
PubMed: 40328673
DOI: 10.1021/JACS.5C04078
Page generated: Sun Jul 13 22:13:40 2025

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