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Cobalt in PDB 1f78: Solution Structure of Rnase P Rna (M1 Rna) P4 Stem Oligoribonucleotide Complexed with Cobalt (III) Hexamine, uc(Nmr), Minimized Average Structure

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Solution Structure of Rnase P Rna (M1 Rna) P4 Stem Oligoribonucleotide Complexed with Cobalt (III) Hexamine, uc(Nmr), Minimized Average Structure (pdb code 1f78). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Solution Structure of Rnase P Rna (M1 Rna) P4 Stem Oligoribonucleotide Complexed with Cobalt (III) Hexamine, uc(Nmr), Minimized Average Structure, PDB code: 1f78:

Cobalt binding site 1 out of 1 in 1f78

Go back to Cobalt Binding Sites List in 1f78
Cobalt binding site 1 out of 1 in the Solution Structure of Rnase P Rna (M1 Rna) P4 Stem Oligoribonucleotide Complexed with Cobalt (III) Hexamine, uc(Nmr), Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Solution Structure of Rnase P Rna (M1 Rna) P4 Stem Oligoribonucleotide Complexed with Cobalt (III) Hexamine, uc(Nmr), Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co28

b:0.0
occ:1.00
CO A:NCO28 0.0 0.0 1.0
N5 A:NCO28 2.0 0.0 1.0
N3 A:NCO28 2.0 0.0 1.0
N4 A:NCO28 2.0 0.0 1.0
N6 A:NCO28 2.0 0.0 1.0
N1 A:NCO28 2.0 0.0 1.0
N2 A:NCO28 2.0 0.0 1.0
HN53 A:NCO28 2.5 0.0 1.0
HN51 A:NCO28 2.5 0.0 1.0
HN31 A:NCO28 2.5 0.0 1.0
HN52 A:NCO28 2.5 0.0 1.0
HN13 A:NCO28 2.5 0.0 1.0
HN42 A:NCO28 2.5 0.0 1.0
HN43 A:NCO28 2.5 0.0 1.0
HN21 A:NCO28 2.5 0.0 1.0
HN62 A:NCO28 2.5 0.0 1.0
HN11 A:NCO28 2.5 0.0 1.0
HN41 A:NCO28 2.5 0.0 1.0
HN63 A:NCO28 2.5 0.0 1.0
HN33 A:NCO28 2.5 0.0 1.0
HN23 A:NCO28 2.5 0.0 1.0
HN32 A:NCO28 2.5 0.0 1.0
HN22 A:NCO28 2.5 0.0 1.0
HN61 A:NCO28 2.5 0.0 1.0
HN12 A:NCO28 2.5 0.0 1.0
H42 A:C20 4.3 0.0 1.0
O6 A:G21 4.5 0.0 1.0
H42 A:C8 4.6 0.0 1.0
H8 A:G5 4.7 0.0 1.0
N7 A:G5 4.8 0.0 1.0
N4 A:C20 4.9 0.0 1.0
H41 A:C8 4.9 0.0 1.0

Reference:

M.Schmitz, I.Tinoco Jr.. Solution Structure and Metal-Ion Binding of the P4 Element From Bacterial Rnase P Rna. Rna V. 6 1212 2000.
ISSN: ISSN 1355-8382
PubMed: 10999599
DOI: 10.1017/S1355838200000881
Page generated: Sun Jul 13 17:29:00 2025

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