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Cobalt in PDB 2f0a: Crystal Structure of Monomeric Uncomplexed Form of Xenopus Dishevelled Pdz Domain

Protein crystallography data

The structure of Crystal Structure of Monomeric Uncomplexed Form of Xenopus Dishevelled Pdz Domain, PDB code: 2f0a was solved by N.Friedland, L.-W.Hung, B.Cheyette, R.T.Moon, T.N.Earnest, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.45 / 1.80
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 89.834, 89.834, 82.471, 90.00, 90.00, 120.00
R / Rfree (%) 21.4 / 25.3

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Monomeric Uncomplexed Form of Xenopus Dishevelled Pdz Domain (pdb code 2f0a). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Monomeric Uncomplexed Form of Xenopus Dishevelled Pdz Domain, PDB code: 2f0a:

Cobalt binding site 1 out of 1 in 2f0a

Go back to Cobalt Binding Sites List in 2f0a
Cobalt binding site 1 out of 1 in the Crystal Structure of Monomeric Uncomplexed Form of Xenopus Dishevelled Pdz Domain


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Monomeric Uncomplexed Form of Xenopus Dishevelled Pdz Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Co349

b:21.1
occ:0.70
NE2 D:HIS344 1.9 18.7 1.0
ND1 B:HIS344 1.9 27.5 1.0
NE2 B:HIS346 2.1 35.1 1.0
NE2 D:HIS346 2.1 38.7 1.0
CD2 D:HIS344 2.7 30.3 1.0
CE1 B:HIS344 2.9 35.9 1.0
CE1 B:HIS346 2.9 37.5 1.0
CE1 D:HIS344 3.0 38.0 1.0
CD2 D:HIS346 3.0 35.7 1.0
CG B:HIS344 3.0 31.8 1.0
CE1 D:HIS346 3.1 44.6 1.0
CD2 B:HIS346 3.2 28.6 1.0
CB B:HIS344 3.4 29.2 1.0
CG D:HIS344 3.9 23.7 1.0
NE2 B:HIS344 4.0 38.3 1.0
ND1 D:HIS344 4.0 23.5 1.0
ND1 B:HIS346 4.1 34.3 1.0
CD2 B:HIS344 4.1 35.0 1.0
CG D:HIS346 4.2 26.1 1.0
ND1 D:HIS346 4.2 35.0 1.0
CG B:HIS346 4.2 41.4 1.0
CA B:HIS344 5.0 28.7 1.0

Reference:

N.Friedland, L.-W.Hung, B.Cheyette, J.R.Miller, R.T.Moon, T.N.Earnest. Conformational Flexibility in the Pdz Domain of Dishevelled Induced By Target Binding To Be Published.
Page generated: Sun Jul 13 18:13:10 2025

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