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Cobalt in PDB 2r1p: Opda From Agrobacterium Radiobacter with Bound Product Diethyl Thiophosphate From Co-Crystallisation with Tetraethyl Dithiopyrophosphate- 1.8 A
Enzymatic activity of Opda From Agrobacterium Radiobacter with Bound Product Diethyl Thiophosphate From Co-Crystallisation with Tetraethyl Dithiopyrophosphate- 1.8 A
All present enzymatic activity of Opda From Agrobacterium Radiobacter with Bound Product Diethyl Thiophosphate From Co-Crystallisation with Tetraethyl Dithiopyrophosphate- 1.8 A:
3.1.8.1;
3.1.8.1;
Protein crystallography data
The structure of Opda From Agrobacterium Radiobacter with Bound Product Diethyl Thiophosphate From Co-Crystallisation with Tetraethyl Dithiopyrophosphate- 1.8 A, PDB code: 2r1p
was solved by
D.L.Ollis,
C.J.Jackson,
J.L.Foo,
H.K.Kim,
P.D.Carr,
J.W.Liu,
G.Salem,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 20.00 / 1.80 |
| Space group | P 31 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 108.876, 108.876, 62.839, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 16.2 / 19.5 |
Other elements in 2r1p:
The structure of Opda From Agrobacterium Radiobacter with Bound Product Diethyl Thiophosphate From Co-Crystallisation with Tetraethyl Dithiopyrophosphate- 1.8 A also contains other interesting chemical elements:
| Iron | (Fe) | 1 atom |
Cobalt Binding Sites:
The binding sites of Cobalt atom in the Opda From Agrobacterium Radiobacter with Bound Product Diethyl Thiophosphate From Co-Crystallisation with Tetraethyl Dithiopyrophosphate- 1.8 A
(pdb code 2r1p). This binding sites where shown within
5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Opda From Agrobacterium Radiobacter with Bound Product Diethyl Thiophosphate From Co-Crystallisation with Tetraethyl Dithiopyrophosphate- 1.8 A, PDB code: 2r1p:
In total only one binding site of Cobalt was determined in the Opda From Agrobacterium Radiobacter with Bound Product Diethyl Thiophosphate From Co-Crystallisation with Tetraethyl Dithiopyrophosphate- 1.8 A, PDB code: 2r1p:
Cobalt binding site 1 out of 1 in 2r1p
Go back to
Cobalt Binding Sites List in 2r1p
Cobalt binding site 1 out
of 1 in the Opda From Agrobacterium Radiobacter with Bound Product Diethyl Thiophosphate From Co-Crystallisation with Tetraethyl Dithiopyrophosphate- 1.8 A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 1 of Opda From Agrobacterium Radiobacter with Bound Product Diethyl Thiophosphate From Co-Crystallisation with Tetraethyl Dithiopyrophosphate- 1.8 A within 5.0Å range:
|
Reference:
C.J.Jackson,
J.L.Foo,
H.K.Kim,
P.D.Carr,
J.W.Liu,
G.Salem,
D.L.Ollis.
In Crystallo Capture of A Michaelis Complex and Product-Binding Modes of A Bacterial Phosphotriesterase J.Mol.Biol. V. 375 1189 2008.
ISSN: ISSN 0022-2836
PubMed: 18082180
DOI: 10.1016/J.JMB.2007.10.061
Page generated: Sun Jul 13 18:29:23 2025
ISSN: ISSN 0022-2836
PubMed: 18082180
DOI: 10.1016/J.JMB.2007.10.061
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