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Cobalt in PDB 2y3b: Co-Bound Form of Cupriavidus Metallidurans CH34 Cnrxs

Protein crystallography data

The structure of Co-Bound Form of Cupriavidus Metallidurans CH34 Cnrxs, PDB code: 2y3b was solved by J.Trepreau, E.Girard, A.P.Maillard, E.De Rosny, I.Petit-Haertlein, R.Kahn, J.Coves, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.575 / 1.55
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 33.033, 33.033, 196.226, 90.00, 90.00, 90.00
R / Rfree (%) 17.62 / 20.38

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Co-Bound Form of Cupriavidus Metallidurans CH34 Cnrxs (pdb code 2y3b). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Co-Bound Form of Cupriavidus Metallidurans CH34 Cnrxs, PDB code: 2y3b:

Cobalt binding site 1 out of 1 in 2y3b

Go back to Cobalt Binding Sites List in 2y3b
Cobalt binding site 1 out of 1 in the Co-Bound Form of Cupriavidus Metallidurans CH34 Cnrxs


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Co-Bound Form of Cupriavidus Metallidurans CH34 Cnrxs within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co1149

b:20.3
occ:1.00
NE2 A:HIS46 2.1 19.0 1.0
NE2 A:HIS42 2.1 20.2 1.0
NE2 A:HIS119 2.1 17.2 1.0
OE2 A:GLU63 2.1 20.1 1.0
OE1 A:GLU63 2.2 19.7 1.0
CD A:GLU63 2.4 19.3 1.0
SD A:MET123 2.5 20.6 1.0
CE1 A:HIS42 3.0 23.1 1.0
CD2 A:HIS119 3.1 20.1 1.0
CE1 A:HIS46 3.1 21.7 1.0
CE1 A:HIS119 3.1 19.2 1.0
CD2 A:HIS46 3.1 20.2 1.0
CD2 A:HIS42 3.1 19.7 1.0
CE A:MET123 3.3 21.1 1.0
CG A:MET123 3.4 18.0 1.0
CG A:GLU63 3.9 19.8 1.0
ND1 A:HIS42 4.2 21.5 1.0
ND1 A:HIS46 4.2 21.5 1.0
CG A:HIS119 4.2 18.3 1.0
ND1 A:HIS119 4.2 19.7 1.0
CG A:HIS42 4.3 20.3 1.0
CG A:HIS46 4.3 19.8 1.0
O A:HOH2041 4.3 26.6 1.0
O A:HOH2042 4.3 43.7 1.0
CB A:MET123 4.8 18.9 1.0
CB A:GLU63 4.8 20.4 1.0

Reference:

J.Trepreau, E.Girard, A.P.Maillard, E.De Rosny, I.Petit-Haertlein, R.Kahn, J.Coves. Structural Basis For Metal Sensing By Cnrx. J.Mol.Biol. V. 408 766 2011.
ISSN: ISSN 0022-2836
PubMed: 21414325
DOI: 10.1016/J.JMB.2011.03.014
Page generated: Sun Jul 13 18:38:14 2025

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