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Cobalt in PDB 3iuh: CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
Enzymatic activity of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
All present enzymatic activity of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase:
5.3.1.14;
5.3.1.14;
Protein crystallography data
The structure of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase, PDB code: 3iuh
was solved by
H.Yoshida,
M.Yamaji,
T.Ishii,
K.Izumori,
S.Kamitori,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 39.02 / 2.00 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 78.072, 104.960, 113.369, 90.00, 108.23, 90.00 |
| R / Rfree (%) | 18.3 / 22.5 |
Cobalt Binding Sites:
The binding sites of Cobalt atom in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
(pdb code 3iuh). This binding sites where shown within
5.0 Angstroms radius around Cobalt atom.
In total 8 binding sites of Cobalt where determined in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase, PDB code: 3iuh:
Jump to Cobalt binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Cobalt where determined in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase, PDB code: 3iuh:
Jump to Cobalt binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Cobalt binding site 1 out of 8 in 3iuh
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Cobalt Binding Sites List in 3iuh
Cobalt binding site 1 out
of 8 in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 1 of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase within 5.0Å range:
|
Cobalt binding site 2 out of 8 in 3iuh
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Cobalt Binding Sites List in 3iuh
Cobalt binding site 2 out
of 8 in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 2 of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase within 5.0Å range:
|
Cobalt binding site 3 out of 8 in 3iuh
Go back to
Cobalt Binding Sites List in 3iuh
Cobalt binding site 3 out
of 8 in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 3 of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase within 5.0Å range:
|
Cobalt binding site 4 out of 8 in 3iuh
Go back to
Cobalt Binding Sites List in 3iuh
Cobalt binding site 4 out
of 8 in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 4 of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase within 5.0Å range:
|
Cobalt binding site 5 out of 8 in 3iuh
Go back to
Cobalt Binding Sites List in 3iuh
Cobalt binding site 5 out
of 8 in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 5 of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase within 5.0Å range:
|
Cobalt binding site 6 out of 8 in 3iuh
Go back to
Cobalt Binding Sites List in 3iuh
Cobalt binding site 6 out
of 8 in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 6 of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase within 5.0Å range:
|
Cobalt binding site 7 out of 8 in 3iuh
Go back to
Cobalt Binding Sites List in 3iuh
Cobalt binding site 7 out
of 8 in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 7 of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase within 5.0Å range:
|
Cobalt binding site 8 out of 8 in 3iuh
Go back to
Cobalt Binding Sites List in 3iuh
Cobalt binding site 8 out
of 8 in the CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 8 of CO2+-Bound Form of Pseudomonas Stutzeri L-Rhamnose Isomerase within 5.0Å range:
|
Reference:
H.Yoshida,
M.Yamaji,
T.Ishii,
K.Izumori,
S.Kamitori.
Catalytic Reaction Mechanism of Pseudomonas Stutzeri L-Rhamnose Isomerase Deduced From X-Ray Structures Febs J. V. 277 1045 2010.
ISSN: ISSN 1742-464X
PubMed: 20088877
DOI: 10.1111/J.1742-4658.2009.07548.X
Page generated: Sun Jul 13 19:02:09 2025
ISSN: ISSN 1742-464X
PubMed: 20088877
DOI: 10.1111/J.1742-4658.2009.07548.X
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