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Cobalt in PDB 4q3w: Crystal Structure of C. Violaceum Phenylalanine Hydroxylase D139E Mutation

Enzymatic activity of Crystal Structure of C. Violaceum Phenylalanine Hydroxylase D139E Mutation

All present enzymatic activity of Crystal Structure of C. Violaceum Phenylalanine Hydroxylase D139E Mutation:
1.14.16.1;

Protein crystallography data

The structure of Crystal Structure of C. Violaceum Phenylalanine Hydroxylase D139E Mutation, PDB code: 4q3w was solved by J.A.Ronau, M.M.Abu-Omar, C.Das, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.81 / 1.40
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 37.003, 38.673, 47.813, 76.66, 72.86, 85.60
R / Rfree (%) 15.8 / 19.7

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of C. Violaceum Phenylalanine Hydroxylase D139E Mutation (pdb code 4q3w). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of C. Violaceum Phenylalanine Hydroxylase D139E Mutation, PDB code: 4q3w:

Cobalt binding site 1 out of 1 in 4q3w

Go back to Cobalt Binding Sites List in 4q3w
Cobalt binding site 1 out of 1 in the Crystal Structure of C. Violaceum Phenylalanine Hydroxylase D139E Mutation


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of C. Violaceum Phenylalanine Hydroxylase D139E Mutation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co301

b:8.1
occ:1.00
O A:HOH402 2.0 13.0 1.0
NE2 A:HIS138 2.1 8.5 1.0
O A:HOH401 2.1 13.4 1.0
OE2 A:GLU184 2.1 8.6 1.0
NE2 A:HIS143 2.1 7.7 1.0
OE1 A:GLU184 2.2 7.0 1.0
CD A:GLU184 2.5 6.4 1.0
CE1 A:HIS138 3.0 8.5 1.0
CE1 A:HIS143 3.1 7.1 1.0
CD2 A:HIS138 3.1 8.8 1.0
CD2 A:HIS143 3.1 7.9 1.0
CG A:GLU184 4.0 6.2 1.0
O A:HOH403 4.0 14.1 1.0
ND1 A:HIS138 4.1 8.0 1.0
ND1 A:HIS143 4.2 6.9 1.0
CG A:HIS138 4.2 7.7 1.0
O A:HOH572 4.2 31.4 1.0
CG A:HIS143 4.3 7.8 1.0
O A:HOH542 4.3 24.4 1.0
OE2 A:GLU139 4.6 16.9 1.0
CB A:ALA199 4.7 6.7 1.0
CB A:GLU184 4.9 5.8 1.0
CG A:GLU139 4.9 14.0 1.0

Reference:

J.A.Ronau, L.N.Paul, J.E.Fuchs, K.R.Liedl, M.M.Abu-Omar, C.Das. A Conserved Acidic Residue in Phenylalanine Hydroxylase Contributes to Cofactor Affinity and Catalysis. Biochemistry V. 53 6834 2014.
ISSN: ISSN 0006-2960
PubMed: 25295853
DOI: 10.1021/BI500734H
Page generated: Tue Jul 30 17:26:23 2024

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