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Cobalt in PDB 5tko: Rna Heptamer Duplex with One 2'-5'-Linkage

Protein crystallography data

The structure of Rna Heptamer Duplex with One 2'-5'-Linkage, PDB code: 5tko was solved by Z.Luo, J.Sheng, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.58 / 1.52
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 26.541, 52.941, 27.732, 90.00, 95.95, 90.00
R / Rfree (%) 14.4 / 17.7

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Rna Heptamer Duplex with One 2'-5'-Linkage (pdb code 5tko). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Rna Heptamer Duplex with One 2'-5'-Linkage, PDB code: 5tko:

Cobalt binding site 1 out of 1 in 5tko

Go back to Cobalt Binding Sites List in 5tko
Cobalt binding site 1 out of 1 in the Rna Heptamer Duplex with One 2'-5'-Linkage


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Rna Heptamer Duplex with One 2'-5'-Linkage within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co101

b:34.6
occ:1.00
O A:HOH223 1.8 38.8 1.0
O A:HOH230 1.8 31.4 1.0
O A:HOH231 2.2 37.8 1.0
O A:HOH228 2.3 30.1 1.0
O A:HOH211 4.5 34.4 1.0
OP1 A:C4 4.5 22.4 1.0

Reference:

Z.Luo, J.Sheng, R.Wang. Rna Heptamer Duplex with One 2'-5'-Linkage To Be Published.
Page generated: Tue Jul 30 18:13:18 2024

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