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Cobalt in PDB 6auh: Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A

Protein crystallography data

The structure of Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A, PDB code: 6auh was solved by L.Olshansky, J.Vallapurakal, R.Huerta-Lavorie, A.I.Nguyen, T.D.Tilley, A.S.Borovik, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.29 / 1.60
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 57.701, 57.701, 183.768, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 21.9

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A (pdb code 6auh). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total 4 binding sites of Cobalt where determined in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A, PDB code: 6auh:
Jump to Cobalt binding site number: 1; 2; 3; 4;

Cobalt binding site 1 out of 4 in 6auh

Go back to Cobalt Binding Sites List in 6auh
Cobalt binding site 1 out of 4 in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:43.0
occ:0.80
CO4 A:OL5201 0.0 43.0 0.8
O05 A:OL5201 1.8 41.1 0.8
O15 A:OL5201 1.9 38.4 0.8
O07 A:OL5201 1.9 42.3 0.8
O12 A:OL5201 2.0 32.4 0.8
O03 A:OL5201 2.0 39.7 0.8
N07 A:OL5201 2.3 43.4 0.8
CO2 A:OL5201 2.6 43.8 0.8
CO3 A:OL5201 2.6 50.9 0.8
CO1 A:OL5201 2.7 47.7 0.8
C04 A:OL5201 3.0 39.7 0.8
C40 A:OL5201 3.1 50.0 0.8
C44 A:OL5201 3.1 44.8 0.8
O06 A:OL5201 3.2 40.8 0.8
O14 A:OL5201 3.3 41.8 0.8
N05 A:OL5201 4.3 46.1 0.8
O09 A:OL5201 4.3 43.2 0.8
O11 A:OL5201 4.3 47.1 0.8
C37 A:OL5201 4.3 25.9 0.8
O08 A:OL5201 4.3 42.0 0.8
N06 A:OL5201 4.3 49.2 0.8
C41 A:OL5201 4.4 50.9 0.8
O10 A:OL5201 4.4 47.5 0.8
C43 A:OL5201 4.5 48.3 0.8
C02 A:OL5201 4.6 19.8 0.8
C32 A:OL5201 4.6 44.5 0.8
C28 A:OL5201 4.7 50.8 0.8
C16 A:OL5201 4.9 50.8 0.8
C42 A:OL5201 5.0 43.3 0.8

Cobalt binding site 2 out of 4 in 6auh

Go back to Cobalt Binding Sites List in 6auh
Cobalt binding site 2 out of 4 in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:47.7
occ:0.80
CO1 A:OL5201 0.0 47.7 0.8
O05 A:OL5201 1.8 41.1 0.8
O10 A:OL5201 2.0 47.5 0.8
O06 A:OL5201 2.0 40.8 0.8
O07 A:OL5201 2.0 42.3 0.8
O08 A:OL5201 2.0 42.0 0.8
CO2 A:OL5201 2.7 43.8 0.8
CO4 A:OL5201 2.7 43.0 0.8
CO3 A:OL5201 2.7 50.9 0.8
C16 A:OL5201 2.9 50.8 0.8
O11 A:OL5201 3.1 47.1 0.8
O09 A:OL5201 3.3 43.2 0.8
O12 A:OL5201 3.5 32.4 0.8
N07 A:OL5201 3.5 43.4 0.8
C40 A:OL5201 4.0 50.0 0.8
O03 A:OL5201 4.2 39.7 0.8
C17 A:OL5201 4.3 48.0 0.8
O14 A:OL5201 4.3 41.8 0.8
C44 A:OL5201 4.3 44.8 0.8
O15 A:OL5201 4.3 38.4 0.8
N05 A:OL5201 4.4 46.1 0.8
N06 A:OL5201 4.6 49.2 0.8
C04 A:OL5201 4.7 39.7 0.8
C24 A:OL5201 4.8 53.0 0.8

Cobalt binding site 3 out of 4 in 6auh

Go back to Cobalt Binding Sites List in 6auh
Cobalt binding site 3 out of 4 in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 3 of Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:50.9
occ:0.80
CO3 A:OL5201 0.0 50.9 0.8
O06 A:OL5201 1.8 40.8 0.8
O12 A:OL5201 1.8 32.4 0.8
O07 A:OL5201 1.9 42.3 0.8
O11 A:OL5201 2.1 47.1 0.8
N06 A:OL5201 2.1 49.2 0.8
CO4 A:OL5201 2.6 43.0 0.8
CO2 A:OL5201 2.7 43.8 0.8
CO1 A:OL5201 2.7 47.7 0.8
C28 A:OL5201 3.0 50.8 0.8
C34 A:OL5201 3.1 53.4 0.8
O15 A:OL5201 3.1 38.4 0.8
C16 A:OL5201 3.2 50.8 0.8
O05 A:OL5201 3.3 41.1 0.8
O10 A:OL5201 3.5 47.5 0.8
N05 A:OL5201 3.5 46.1 0.8
C32 A:OL5201 4.1 44.5 0.8
C24 A:OL5201 4.2 53.0 0.8
O03 A:OL5201 4.2 39.7 0.8
C29 A:OL5201 4.3 52.8 0.8
C35 A:OL5201 4.3 50.2 0.8
O08 A:OL5201 4.4 42.0 0.8
O14 A:OL5201 4.4 41.8 0.8
O09 A:OL5201 4.4 43.2 0.8
N07 A:OL5201 4.5 43.4 0.8
C17 A:OL5201 4.7 48.0 0.8
C04 A:OL5201 4.7 39.7 0.8
C30 A:OL5201 4.8 50.2 0.8
C40 A:OL5201 5.0 50.0 0.8

Cobalt binding site 4 out of 4 in 6auh

Go back to Cobalt Binding Sites List in 6auh
Cobalt binding site 4 out of 4 in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 4 of Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:43.8
occ:0.80
CO2 A:OL5201 0.0 43.8 0.8
N05 A:OL5201 2.0 46.1 0.8
O14 A:OL5201 2.0 41.8 0.8
O05 A:OL5201 2.0 41.1 0.8
O06 A:OL5201 2.0 40.8 0.8
O09 A:OL5201 2.0 43.2 0.8
O12 A:OL5201 2.1 32.4 0.8
CO4 A:OL5201 2.6 43.0 0.8
CO1 A:OL5201 2.7 47.7 0.8
CO3 A:OL5201 2.7 50.9 0.8
C04 A:OL5201 2.8 39.7 0.8
C32 A:OL5201 2.8 44.5 0.8
C24 A:OL5201 2.9 53.0 0.8
O03 A:OL5201 3.0 39.7 0.8
O08 A:OL5201 3.3 42.0 0.8
O07 A:OL5201 3.3 42.3 0.8
N06 A:OL5201 3.5 49.2 0.8
O15 A:OL5201 4.1 38.4 0.8
C28 A:OL5201 4.1 50.8 0.8
O11 A:OL5201 4.2 47.1 0.8
C33 A:OL5201 4.2 45.7 0.8
C37 A:OL5201 4.2 25.9 0.8
C25 A:OL5201 4.2 52.6 0.8
O10 A:OL5201 4.2 47.5 0.8
C34 A:OL5201 4.2 53.4 0.8
N07 A:OL5201 4.4 43.4 0.8
C16 A:OL5201 4.7 50.8 0.8
C26 A:OL5201 4.7 53.2 0.8
CE1 A:TYR112 4.8 35.2 1.0
CZ A:TYR112 4.9 39.2 1.0
C44 A:OL5201 4.9 44.8 0.8
OH A:TYR112 5.0 46.0 1.0

Reference:

L.Olshansky, R.Huerta-Lavorie, A.I.Nguyen, J.Vallapurackal, A.Furst, T.D.Tilley, A.S.Borovik. Artificial Metalloproteins Containing Co J. Am. Chem. Soc. V. 140 2739 2018.
ISSN: ESSN 1520-5126
PubMed: 29401385
DOI: 10.1021/JACS.7B13052
Page generated: Sun Jul 13 20:49:36 2025

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