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Cobalt in PDB 6g35: Crystal Structure of Haspin in Complex with 5-Bromotubercidin

Enzymatic activity of Crystal Structure of Haspin in Complex with 5-Bromotubercidin

All present enzymatic activity of Crystal Structure of Haspin in Complex with 5-Bromotubercidin:
2.7.11.1;

Protein crystallography data

The structure of Crystal Structure of Haspin in Complex with 5-Bromotubercidin, PDB code: 6g35 was solved by C.Heroven, A.Chaikuad, C.Bountra, C.H.Arrowsmith, A.M.Edwards, S.Knapp, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.87 / 1.55
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 78.301, 78.760, 79.300, 90.00, 90.00, 90.00
R / Rfree (%) 16 / 18.3

Other elements in 6g35:

The structure of Crystal Structure of Haspin in Complex with 5-Bromotubercidin also contains other interesting chemical elements:

Bromine (Br) 4 atoms
Sodium (Na) 1 atom

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Haspin in Complex with 5-Bromotubercidin (pdb code 6g35). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Haspin in Complex with 5-Bromotubercidin, PDB code: 6g35:

Cobalt binding site 1 out of 1 in 6g35

Go back to Cobalt Binding Sites List in 6g35
Cobalt binding site 1 out of 1 in the Crystal Structure of Haspin in Complex with 5-Bromotubercidin


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Haspin in Complex with 5-Bromotubercidin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co804

b:26.8
occ:0.50
NE2 A:HIS477 2.0 39.8 1.0
NE2 A:HIS563 2.0 27.5 1.0
SG A:CYS467 2.2 48.3 1.0
O A:HOH1181 2.4 44.2 1.0
CE1 A:HIS477 3.0 41.1 1.0
CE1 A:HIS563 3.0 26.1 1.0
CD2 A:HIS477 3.0 37.9 1.0
CD2 A:HIS563 3.0 26.3 1.0
CB A:CYS467 3.3 50.1 1.0
ND1 A:HIS477 4.1 41.6 1.0
ND1 A:HIS563 4.1 24.8 1.0
CG A:HIS477 4.1 38.0 1.0
CG A:HIS563 4.2 24.0 1.0
CA A:CYS467 4.6 53.6 1.0
CB A:GLN-2 4.7 37.5 0.7
CG A:GLN469 4.8 64.7 1.0

Reference:

C.Heroven, V.Georgi, G.K.Ganotra, P.Brennan, F.Wolfreys, R.C.Wade, A.E.Fernandez-Montalvan, A.Chaikuad, S.Knapp. Halogen-Aromatic Pi Interactions Modulate Inhibitor Residence Times. Angew. Chem. Int. Ed. Engl. V. 57 7220 2018.
ISSN: ESSN 1521-3773
PubMed: 29601130
DOI: 10.1002/ANIE.201801666
Page generated: Sun Jul 13 20:56:42 2025

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