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Cobalt in PDB 6iiy: Crystal Structure of Deacetylase Triple Mutant (ORF2*T) That Involving in Teicoplanin Biosynthetic Pathway

Protein crystallography data

The structure of Crystal Structure of Deacetylase Triple Mutant (ORF2*T) That Involving in Teicoplanin Biosynthetic Pathway, PDB code: 6iiy was solved by T.L.Li, C.M.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.29
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 93.451, 66.671, 43.390, 90.00, 92.59, 90.00
R / Rfree (%) 16.2 / 18.2

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Deacetylase Triple Mutant (ORF2*T) That Involving in Teicoplanin Biosynthetic Pathway (pdb code 6iiy). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Deacetylase Triple Mutant (ORF2*T) That Involving in Teicoplanin Biosynthetic Pathway, PDB code: 6iiy:

Cobalt binding site 1 out of 1 in 6iiy

Go back to Cobalt Binding Sites List in 6iiy
Cobalt binding site 1 out of 1 in the Crystal Structure of Deacetylase Triple Mutant (ORF2*T) That Involving in Teicoplanin Biosynthetic Pathway


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Deacetylase Triple Mutant (ORF2*T) That Involving in Teicoplanin Biosynthetic Pathway within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co302

b:11.4
occ:1.00
O A:HOH412 2.1 13.1 1.0
N3 A:IMD301 2.1 15.3 1.0
ND1 A:HIS16 2.1 11.2 1.0
NE2 A:HIS164 2.1 11.6 1.0
OD2 A:ASP19 2.2 9.8 1.0
OD1 A:ASP19 2.5 10.4 1.0
CG A:ASP19 2.7 9.9 1.0
CE1 A:HIS164 3.0 11.2 1.0
CE1 A:HIS16 3.1 11.6 1.0
C4 A:IMD301 3.1 17.5 1.0
C2 A:IMD301 3.1 17.1 1.0
CG A:HIS16 3.2 10.4 1.0
CD2 A:HIS164 3.2 11.1 1.0
CB A:HIS16 3.5 10.1 1.0
O A:HOH402 4.1 20.1 1.0
CB A:ASP19 4.1 9.4 1.0
ND1 A:HIS164 4.2 11.2 1.0
NE2 A:HIS16 4.2 11.9 1.0
OD1 A:ASP18 4.2 12.7 1.0
C5 A:IMD301 4.3 17.5 1.0
N1 A:IMD301 4.3 18.8 1.0
CD2 A:HIS16 4.3 11.3 1.0
CG A:HIS164 4.3 10.5 1.0
N A:HIS16 4.3 9.4 1.0
O A:HOH562 4.3 17.7 1.0
CB A:PRO15 4.5 10.2 1.0
CA A:HIS16 4.5 9.6 1.0
CE2 A:TYR190 5.0 20.5 1.0
O A:HOH487 5.0 13.0 1.0
OH A:TYR190 5.0 22.2 1.0

Reference:

T.L.Li, C.M.Huang. Crystal Structure of Deacetylase Mutant That Involving in Teicoplanin Biosynthetic Pathway To Be Published.
Page generated: Sun Jul 13 20:59:16 2025

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