Cobalt »
PDB 6kgh-6oxc »
6m5j »
Cobalt in PDB 6m5j: U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence
Protein crystallography data
The structure of U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence, PDB code: 6m5j
was solved by
M.H.Hou,
C.M.Chien,
R.B.Satange,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 19.22 / 1.65 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 57.630, 62.086, 30.747, 90.00, 121.84, 90.00 |
| R / Rfree (%) | 18.7 / 20.8 |
Other elements in 6m5j:
The structure of U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence also contains other interesting chemical elements:
| Chlorine | (Cl) | 4 atoms |
Cobalt Binding Sites:
The binding sites of Cobalt atom in the U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence
(pdb code 6m5j). This binding sites where shown within
5.0 Angstroms radius around Cobalt atom.
In total 4 binding sites of Cobalt where determined in the U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence, PDB code: 6m5j:
Jump to Cobalt binding site number: 1; 2; 3; 4;
In total 4 binding sites of Cobalt where determined in the U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence, PDB code: 6m5j:
Jump to Cobalt binding site number: 1; 2; 3; 4;
Cobalt binding site 1 out of 4 in 6m5j
Go back to
Cobalt Binding Sites List in 6m5j
Cobalt binding site 1 out
of 4 in the U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 1 of U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence within 5.0Å range:
|
Cobalt binding site 2 out of 4 in 6m5j
Go back to
Cobalt Binding Sites List in 6m5j
Cobalt binding site 2 out
of 4 in the U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 2 of U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence within 5.0Å range:
|
Cobalt binding site 3 out of 4 in 6m5j
Go back to
Cobalt Binding Sites List in 6m5j
Cobalt binding site 3 out
of 4 in the U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 3 of U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence within 5.0Å range:
|
Cobalt binding site 4 out of 4 in 6m5j
Go back to
Cobalt Binding Sites List in 6m5j
Cobalt binding site 4 out
of 4 in the U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 4 of U Shaped Head to Head Four-Way Junction in D(Ttctgctgctgaa/Ttctgcagctgaa) Sequence within 5.0Å range:
|
Reference:
C.M.Chien,
P.C.Wu,
R.Satange,
C.C.Chang,
Z.L.Lai,
L.D.Hagler,
S.C.Zimmerman,
M.H.Hou.
Structural Basis For Targeting T:T Mismatch with Triaminotriazine-Acridine Conjugate Induces A U-Shaped Head-to-Head Four-Way Junction in Ctg Repeat Dna. J.Am.Chem.Soc. V. 142 11165 2020.
ISSN: ESSN 1520-5126
PubMed: 32478511
DOI: 10.1021/JACS.0C03591
Page generated: Sun Jul 13 21:08:09 2025
ISSN: ESSN 1520-5126
PubMed: 32478511
DOI: 10.1021/JACS.0C03591
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