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Cobalt in PDB 8hym: Crystal Structure of Athppd-Y18030 Complex

Enzymatic activity of Crystal Structure of Athppd-Y18030 Complex

All present enzymatic activity of Crystal Structure of Athppd-Y18030 Complex:
1.13.11.27;

Protein crystallography data

The structure of Crystal Structure of Athppd-Y18030 Complex, PDB code: 8hym was solved by J.Dong, H.-Y.Lin, G.-F.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.57 / 1.79
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 77.689, 84.168, 63.037, 90, 100.64, 90
R / Rfree (%) 18.2 / 21.9

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Athppd-Y18030 Complex (pdb code 8hym). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Athppd-Y18030 Complex, PDB code: 8hym:

Cobalt binding site 1 out of 1 in 8hym

Go back to Cobalt Binding Sites List in 8hym
Cobalt binding site 1 out of 1 in the Crystal Structure of Athppd-Y18030 Complex


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Athppd-Y18030 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co501

b:25.5
occ:1.00
O14 A:T8H502 1.9 28.6 1.0
O24 A:T8H502 2.0 24.5 1.0
OE1 A:GLU394 2.0 22.9 1.0
O A:HOH651 2.2 23.0 1.0
NE2 A:HIS226 2.2 22.4 1.0
NE2 A:HIS308 2.3 23.5 1.0
C12 A:T8H502 3.0 31.1 1.0
CD A:GLU394 3.1 24.3 1.0
CE1 A:HIS308 3.2 26.2 1.0
C19 A:T8H502 3.2 30.7 1.0
CE1 A:HIS226 3.2 22.6 1.0
CD2 A:HIS226 3.2 24.1 1.0
CD2 A:HIS308 3.3 25.9 1.0
OE2 A:GLU394 3.4 24.3 1.0
C18 A:T8H502 3.6 31.1 1.0
C1 A:T8H502 4.2 31.6 1.0
ND1 A:HIS308 4.3 24.0 1.0
ND1 A:HIS226 4.3 23.9 1.0
O A:PHE419 4.4 32.3 1.0
CG A:HIS226 4.4 22.0 1.0
CB A:ALA310 4.4 23.8 1.0
CG A:HIS308 4.4 23.2 1.0
CG A:GLU394 4.4 24.3 1.0
C20 A:T8H502 4.5 30.5 1.0
CG2 A:VAL228 4.5 24.4 1.0
CE2 A:PHE381 4.6 27.0 1.0
CD2 A:PHE419 4.6 27.0 1.0
CB A:GLU394 4.7 22.4 1.0
C11 A:T8H502 4.7 30.8 1.0
CB A:PHE419 4.8 29.4 1.0
C6 A:T8H502 4.9 31.8 1.0

Reference:

J.Dong, H.-Y.Lin, G.-F.Yang. Crystal Structure of Athppd-Y18030 Complex To Be Published.
Page generated: Tue Jul 30 19:53:43 2024

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