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Cobalt in PDB 9efy: Co-Mahf-9 A8G Metal Alpha-Helix Framework

Protein crystallography data

The structure of Co-Mahf-9 A8G Metal Alpha-Helix Framework, PDB code: 9efy was solved by R.M.Richardson-Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.56 / 0.91
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 10.32, 16.24, 21.57, 67.92, 89.37, 71.85
R / Rfree (%) 18 / 20.7

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Co-Mahf-9 A8G Metal Alpha-Helix Framework (pdb code 9efy). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Co-Mahf-9 A8G Metal Alpha-Helix Framework, PDB code: 9efy:

Cobalt binding site 1 out of 1 in 9efy

Go back to Cobalt Binding Sites List in 9efy
Cobalt binding site 1 out of 1 in the Co-Mahf-9 A8G Metal Alpha-Helix Framework


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Co-Mahf-9 A8G Metal Alpha-Helix Framework within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Co101

b:9.3
occ:1.00
NE2 B:HIS7 2.1 9.6 1.0
CE1 B:HIS7 3.0 10.1 1.0
CD2 B:HIS7 3.1 8.9 1.0
HE1 B:HIS7 3.2 12.1 1.0
HD2 B:HIS7 3.3 10.7 1.0
HB13 B:AIB3 3.7 9.9 1.0
ND1 B:HIS7 4.2 10.2 1.0
CG B:HIS7 4.2 9.5 1.0
HB21 B:AIB3 4.4 10.0 1.0
CB1 B:AIB3 4.7 8.2 1.0
HB11 B:AIB3 4.8 9.9 1.0
HD1 B:HIS7 4.9 12.2 1.0

Reference:

R.Richardson-Matthews, K.Velko, B.Bhunia, S.Ghosh, J.Oktawiec, J.S.Brunzelle, V.T.Dang, A.I.Nguyen. Metal-Alpha-Helix Peptide Frameworks. J.Am.Chem.Soc. 2025.
ISSN: ESSN 1520-5126
PubMed: 40328673
DOI: 10.1021/JACS.5C04078
Page generated: Sun Jul 13 22:13:07 2025

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