Cobalt in PDB 9fct: BTUJ1 - Bacteroides Thetaiotaomicron B12 Scavenging Protein

The structure of BTUJ1 - Bacteroides Thetaiotaomicron B12 Scavenging Protein, PDB code: 9fct was solved by C.Clarke, M.Banasik, R.Pickersgill, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	81.09 / 1.60
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	148.891, 51.416, 108.757, 90, 131.79, 90
R / Rfree (%)	18.9 / 21.3

The binding sites of Cobalt atom in the BTUJ1 - Bacteroides Thetaiotaomicron B12 Scavenging Protein (pdb code 9fct). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total 2 binding sites of Cobalt where determined in the BTUJ1 - Bacteroides Thetaiotaomicron B12 Scavenging Protein, PDB code: 9fct:
Jump to Cobalt binding site number: 1; 2;

Cobalt binding site 1 out of 2 in the BTUJ1 - Bacteroides Thetaiotaomicron B12 Scavenging Protein


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of BTUJ1 - Bacteroides Thetaiotaomicron B12 Scavenging Protein within 5.0Å range: probe atom residue distance (Å) B Occ B:Co301 b:12.4 occ:1.00 CO B:CNC301 0.0 12.4 1.0 C1A B:CNC301 1.8 12.3 1.0 N21 B:CNC301 1.9 12.3 1.0 N22 B:CNC301 1.9 11.8 1.0 N23 B:CNC301 1.9 13.1 1.0 N24 B:CNC301 1.9 13.1 1.0 N3B B:CNC301 2.2 12.6 1.0 C19 B:CNC301 2.8 13.3 1.0 C9 B:CNC301 2.8 11.9 1.0 C1 B:CNC301 2.9 12.8 1.0 C11 B:CNC301 2.9 13.0 1.0 C4 B:CNC301 2.9 11.5 1.0 C14 B:CNC301 2.9 14.2 1.0 C6 B:CNC301 3.0 11.0 1.0 C16 B:CNC301 3.0 14.1 1.0 N1A B:CNC301 3.1 13.1 1.0 C2B B:CNC301 3.1 13.8 1.0 C10 B:CNC301 3.2 12.5 1.0 H2B B:CNC301 3.2 14.1 1.0 C9B B:CNC301 3.3 12.8 1.0 H201 B:CNC301 3.3 14.0 1.0 C5 B:CNC301 3.4 10.8 1.0 C15 B:CNC301 3.4 14.5 1.0 C20 B:CNC301 3.5 13.5 1.0 H4B B:CNC301 3.7 11.5 1.0 H202 B:CNC301 3.8 13.4 1.0 C4B B:CNC301 3.9 12.1 1.0 H261 B:CNC301 4.0 12.1 1.0 C18 B:CNC301 4.1 14.1 1.0 C2 B:CNC301 4.1 12.5 1.0 H10 B:CNC301 4.1 12.6 1.0 C3 B:CNC301 4.2 11.7 1.0 C8 B:CNC301 4.2 11.8 1.0 C13 B:CNC301 4.2 15.2 1.0 C12 B:CNC301 4.2 14.0 1.0 H18 B:CNC301 4.2 14.7 1.0 C7 B:CNC301 4.2 10.8 1.0 H421 B:CNC301 4.3 14.2 1.0 C17 B:CNC301 4.3 14.7 1.0 N1B B:CNC301 4.3 14.8 1.0 H471 B:CNC301 4.3 13.2 1.0 H371 B:CNC301 4.4 10.6 1.0 H203 B:CNC301 4.4 14.1 1.0 C8B B:CNC301 4.5 14.0 1.0 C26 B:CNC301 4.5 12.3 1.0 H543 B:CNC301 4.6 13.4 1.0 C47 B:CNC301 4.7 13.6 1.0 C37 B:CNC301 4.8 10.4 1.0 H412 B:CNC301 4.8 12.6 1.0 H3 B:CNC301 4.8 11.2 1.0 H481 B:CNC301 4.8 17.5 1.0 H13 B:CNC301 4.8 15.4 1.0 H262 B:CNC301 4.9 12.8 1.0 H8 B:CNC301 4.9 11.7 1.0 C41 B:CNC301 4.9 12.6 1.0 O B:HOH482 4.9 15.3 1.0 C35 B:CNC301 4.9 10.2 1.0 C48 B:CNC301 5.0 17.6 1.0 H482 B:CNC301 5.0 18.1 1.0 H372 B:CNC301 5.0 10.1 1.0 H472 B:CNC301 5.0 13.0 1.0 C53 B:CNC301 5.0 15.6 1.0

Cobalt binding site 2 out of 2 in the BTUJ1 - Bacteroides Thetaiotaomicron B12 Scavenging Protein


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of BTUJ1 - Bacteroides Thetaiotaomicron B12 Scavenging Protein within 5.0Å range: probe atom residue distance (Å) B Occ A:Co301 b:11.9 occ:1.00 CO A:CNC301 0.0 11.9 1.0 C1A A:CNC301 1.8 12.4 1.0 N22 A:CNC301 1.9 11.5 1.0 N24 A:CNC301 1.9 12.8 1.0 N21 A:CNC301 1.9 11.6 1.0 N23 A:CNC301 1.9 12.9 1.0 N3B A:CNC301 2.2 14.5 1.0 C19 A:CNC301 2.8 12.6 1.0 C9 A:CNC301 2.8 12.0 1.0 C1 A:CNC301 2.9 11.9 1.0 C4 A:CNC301 2.9 10.9 1.0 C11 A:CNC301 2.9 13.0 1.0 C14 A:CNC301 2.9 13.9 1.0 C16 A:CNC301 2.9 13.6 1.0 C6 A:CNC301 3.0 10.8 1.0 C2B A:CNC301 3.0 15.6 1.0 N1A A:CNC301 3.1 13.7 1.0 H2B A:CNC301 3.1 15.9 1.0 C10 A:CNC301 3.2 12.3 1.0 H201 A:CNC301 3.3 13.4 1.0 C9B A:CNC301 3.3 14.4 1.0 C5 A:CNC301 3.3 10.7 1.0 C15 A:CNC301 3.4 14.1 1.0 C20 A:CNC301 3.5 12.8 1.0 H4B A:CNC301 3.7 13.1 1.0 H202 A:CNC301 3.8 12.7 1.0 C4B A:CNC301 3.9 13.8 1.0 H261 A:CNC301 4.0 10.4 1.0 C18 A:CNC301 4.1 13.7 1.0 C8 A:CNC301 4.1 12.0 1.0 C2 A:CNC301 4.1 11.3 1.0 H18 A:CNC301 4.2 14.3 1.0 C3 A:CNC301 4.2 10.9 1.0 H10 A:CNC301 4.2 12.7 1.0 C12 A:CNC301 4.2 14.1 1.0 C13 A:CNC301 4.2 15.4 1.0 H421 A:CNC301 4.2 14.6 1.0 C17 A:CNC301 4.3 14.5 1.0 C7 A:CNC301 4.3 10.7 1.0 N1B A:CNC301 4.3 17.0 1.0 H371 A:CNC301 4.4 10.3 1.0 H471 A:CNC301 4.4 13.3 1.0 H203 A:CNC301 4.4 13.2 1.0 C8B A:CNC301 4.5 16.1 1.0 H543 A:CNC301 4.5 13.2 1.0 C26 A:CNC301 4.6 10.6 1.0 H412 A:CNC301 4.7 13.1 1.0 C47 A:CNC301 4.8 13.9 1.0 C37 A:CNC301 4.8 10.1 1.0 C41 A:CNC301 4.8 13.2 1.0 H3 A:CNC301 4.8 10.4 1.0 H481 A:CNC301 4.8 17.9 1.0 H8 A:CNC301 4.9 12.1 1.0 H262 A:CNC301 4.9 11.0 1.0 C35 A:CNC301 4.9 10.1 1.0 C53 A:CNC301 4.9 14.9 1.0 O A:HOH551 4.9 13.3 1.0 H482 A:CNC301 4.9 18.2 1.0 H13 A:CNC301 5.0 15.5 1.0 C48 A:CNC301 5.0 17.8 1.0 C54 A:CNC301 5.0 13.9 1.0

R.Juodeikis, R.Ulrich, C.Clarke, M.Banasik, M.Warren, R.Pickersgill. To Be Released (2024). To Be Published.