Cobalt in PDB 1ekh: uc(Nmr) Structure of D(Ttggccaa)2 Bound to Chromomycin-A3 and Cobalt

The binding sites of Cobalt atom in the uc(Nmr) Structure of D(Ttggccaa)2 Bound to Chromomycin-A3 and Cobalt (pdb code 1ekh). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the uc(Nmr) Structure of D(Ttggccaa)2 Bound to Chromomycin-A3 and Cobalt, PDB code: 1ekh:

Cobalt binding site 1 out of 1 in the uc(Nmr) Structure of D(Ttggccaa)2 Bound to Chromomycin-A3 and Cobalt


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of uc(Nmr) Structure of D(Ttggccaa)2 Bound to Chromomycin-A3 and Cobalt within 5.0Å range: probe atom residue distance (Å) B Occ A:Co41 b:0.1 occ:1.00 O9 A:CPH33 1.9 0.1 1.0 O9 B:CPH23 1.9 0.1 1.0 O1 A:CPH33 2.0 0.1 1.0 O1 B:CPH23 2.0 0.1 1.0 C9 A:CPH33 2.4 0.1 1.0 C9 B:CPH23 2.5 0.1 1.0 HO8 A:CPH33 2.7 0.1 1.0 HO8 B:CPH23 2.7 0.8 1.0 C1 A:CPH33 2.9 0.1 1.0 C1 B:CPH23 2.9 0.1 1.0 C9A A:CPH33 3.0 0.1 1.0 C9A B:CPH23 3.1 0.1 1.0 O8 A:CPH33 3.4 0.1 1.0 O8 B:CPH23 3.4 0.3 1.0 C8A A:CPH33 3.6 0.1 1.0 C8A B:CPH23 3.6 0.1 1.0 H22 B:DDA36 3.9 0.4 1.0 H1 B:DDA36 3.9 0.1 1.0 H1 B:DDA26 3.9 0.1 1.0 O2 A:DC5 4.0 0.1 1.0 C8 A:CPH33 4.0 0.1 1.0 H1' B:DC15 4.0 0.1 1.0 C8 B:CPH23 4.1 0.2 1.0 O4' B:DC16 4.1 0.1 1.0 H1' A:DC5 4.1 0.1 1.0 O2 B:DC15 4.1 0.1 1.0 O4' A:DC6 4.1 0.1 1.0 H2'' A:DC5 4.1 0.1 1.0 H2'' B:DC15 4.2 0.1 1.0 C2 A:CPH33 4.3 0.1 1.0 H4' B:DC16 4.3 0.1 1.0 H5' B:DC16 4.3 0.2 1.0 C2 B:CPH23 4.4 0.1 1.0 C4A A:CPH33 4.4 0.1 1.0 C4A B:CPH23 4.5 0.2 1.0 H2 A:CPH33 4.5 0.1 1.0 H3 B:DDA26 4.5 0.1 1.0 H22 B:DDA26 4.5 0.1 1.0 H21 A:DG4 4.5 0.1 1.0 H22 B:DG14 4.6 0.1 1.0 H5' A:DC6 4.6 0.1 1.0 H21 B:DG14 4.6 0.1 1.0 H2 B:CPH23 4.6 0.2 1.0 H22 A:DG4 4.6 0.1 1.0 C1 B:DDA36 4.7 0.2 1.0 C2 B:DDA36 4.7 0.3 1.0 C4' B:DC16 4.7 0.1 1.0 C1 B:DDA26 4.8 0.1 1.0 C5A A:CPH33 4.8 0.1 1.0 O5' A:DC6 4.8 0.1 1.0 H4' A:DC6 4.8 0.1 1.0 C5A B:CPH23 4.9 0.1 1.0 H1' B:DC16 4.9 0.1 1.0 C1' B:DC15 5.0 0.1 1.0 C4' A:DC6 5.0 0.1 1.0 N2 B:DG14 5.0 0.1 1.0 C5' A:DC6 5.0 0.1 1.0 O1 B:DDA36 5.0 0.2 1.0 N2 A:DG4 5.0 0.1 1.0 C1' A:DC5 5.0 0.1 1.0

M.Gochin, M.Gochin. N/A N/A.
ISSN: ISSN 0969-2126
PubMed: 10801486
DOI: 10.1016/S0969-2126(00)00124-6