Cobalt in PDB 1fd5: Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex)

The structure of Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex), PDB code: 1fd5 was solved by X.-L.Yang, H.Robinson, Y.-G.Gao, A.H.-J.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 1.10
Space group	C 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	29.584, 54.038, 40.215, 90.00, 90.00, 90.00
R / Rfree (%)	16.8 / 20.3

The structure of Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex) also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Cobalt atom in the Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex) (pdb code 1fd5). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total 2 binding sites of Cobalt where determined in the Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex), PDB code: 1fd5:
Jump to Cobalt binding site number: 1; 2;

Cobalt binding site 1 out of 2 in the Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex)


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex) within 5.0Å range: probe atom residue distance (Å) B Occ A:Co21 b:31.1 occ:1.00 O A:HOH176 2.0 33.7 1.0 O A:HOH174 2.0 26.9 1.0 O A:HOH178 2.0 35.4 1.0 O A:HOH177 2.0 36.1 1.0 O A:HOH175 2.0 30.0 1.0 N7 A:DG2 2.1 18.1 1.0 C8 A:DG2 3.0 19.5 1.0 C5 A:DG2 3.3 15.3 1.0 O6 A:DG2 3.7 14.8 1.0 C6 A:DG2 3.9 13.7 1.0 O A:HOH157 3.9 48.0 1.0 O A:HOH141 4.0 46.7 1.0 O A:HOH109 4.0 26.4 1.0 N9 A:DG2 4.3 17.5 1.0 OP2 A:DG2 4.3 34.0 1.0 C4 A:DG2 4.4 14.7 1.0 O4 A:DT3 4.5 16.2 1.0 OP1 A:DG2 4.6 43.0 1.0 C7 A:DT3 4.6 20.0 1.0 P A:DG2 4.9 30.2 1.0

Cobalt binding site 2 out of 2 in the Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex)


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms (Bisacridine Complex) within 5.0Å range: probe atom residue distance (Å) B Occ B:Co22 b:13.4 occ:0.50 O B:HOH171 2.0 16.8 1.0 O B:HOH170 2.1 16.0 1.0 N7 B:DG12 2.2 12.3 1.0 C8 B:DG12 3.0 12.8 1.0 C5 B:DG12 3.3 11.8 1.0 O B:HOH102 3.5 14.7 0.5 O6 B:DG12 3.8 17.1 1.0 C6 B:DG12 3.9 15.2 1.0 OP2 B:DG12 4.1 12.8 1.0 N9 B:DG12 4.3 11.9 1.0 O B:HOH107 4.3 21.4 1.0 C4 B:DG12 4.4 11.6 1.0 O B:HOH104 4.4 21.1 1.0 O5' B:DG12 5.0 11.3 1.0

X.L.Yang, H.Robinson, Y.G.Gao, A.H.Wang. Binding of A Macrocyclic Bisacridine and Ametantrone to Cgtacg Involves Similar Unusual Intercalation Platforms. Biochemistry V. 39 10950 2000.
ISSN: ISSN 0006-2960
PubMed: 10998231
DOI: 10.1021/BI001319Z