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Cobalt in PDB 1gwm: Carbohydrate Binding Module FAMILY29 Complexed with Glucohexaose

Protein crystallography data

The structure of Carbohydrate Binding Module FAMILY29 Complexed with Glucohexaose, PDB code: 1gwm was solved by S.J.Charnock, D.Nurizzo, G.J.Davies, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.15
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 107.707, 42.858, 35.555, 90.00, 105.40, 90.00
R / Rfree (%) 12.8 / 15.6

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Carbohydrate Binding Module FAMILY29 Complexed with Glucohexaose (pdb code 1gwm). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Carbohydrate Binding Module FAMILY29 Complexed with Glucohexaose, PDB code: 1gwm:

Cobalt binding site 1 out of 1 in 1gwm

Go back to Cobalt Binding Sites List in 1gwm
Cobalt binding site 1 out of 1 in the Carbohydrate Binding Module FAMILY29 Complexed with Glucohexaose


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Carbohydrate Binding Module FAMILY29 Complexed with Glucohexaose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co1154

b:9.0
occ:1.00
ND1 A:HIS152 2.0 11.6 1.0
NE2 A:HIS150 2.1 12.1 1.0
CE1 A:HIS152 2.9 13.1 1.0
CG A:HIS152 3.0 14.0 1.0
CD2 A:HIS150 3.0 15.6 1.0
CE1 A:HIS150 3.1 14.0 1.0
CB A:HIS152 3.4 14.3 1.0
NE2 A:HIS152 4.0 16.9 1.0
CD2 A:HIS152 4.1 16.8 1.0
CD1 A:ILE144 4.1 25.5 1.0
CA A:HIS152 4.1 14.8 1.0
ND1 A:HIS150 4.2 15.5 1.0
CG A:HIS150 4.2 15.9 1.0
N A:HIS152 4.9 15.7 1.0

Reference:

S.J.Charnock, D.Bolam, D.Nurizzo, L.Szabo, V.Mckie, H.Gilbert, G.J.Davies. Promiscuity in Ligand-Binding: the Three-Dimensional Structure of A Piromyces Carbohydrate-Binding Module,CBM29-2,in Complex with Cello- and Mannohexaose Proc.Natl.Acad.Sci.Usa V. 99 14077 2002.
ISSN: ISSN 0027-8424
PubMed: 12391332
DOI: 10.1073/PNAS.212516199
Page generated: Sun Dec 13 10:34:59 2020

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